: Class Jemboss

org.emboss.jemboss
Class Jemboss

java.lang.Object
  |
  +--org.emboss.jemboss.Jemboss

All Implemented Interfaces:

java.awt.event.ActionListener, java.util.EventListener

public class Jemboss

extends java.lang.Object

implements java.awt.event.ActionListener

Java interface to EMBOSS (http://www.emboss.org/) (i) standalone - with a locally installation of EMBOSS. (ii) client / server mode - download the client from a site, such as the HGMP, which runs the Jemboss server.

Inner Class Summary

(package private) class

Jemboss.winExit Extends WindowAdapter to close window

Field Summary

static java.awt.Dimension	jdim Jemboss window dimension
static java.awt.Dimension	jdimExtend
(package private) static uk.ac.mrc.hgmp.embreo.EmbreoParams	mysettings SOAP settings
static PendingResults	resultsManager to manage the pending results
static DragTree	tree
(package private) static boolean	withSoap true if in client-server mode (using SOAP)

Constructor Summary

Jemboss()

Method Summary

void	actionPerformed(java.awt.event.ActionEvent ae) Action event to open the file manager
static void	main(java.lang.String[] args) Launches Jemboss in standalone or client-server mode.

Methods inherited from class java.lang.Object

, clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

tree

public static DragTree tree

mysettings

static uk.ac.mrc.hgmp.embreo.EmbreoParams mysettings

SOAP settings

withSoap

static boolean withSoap

true if in client-server mode (using SOAP)

resultsManager

public static PendingResults resultsManager

to manage the pending results

jdim

public static java.awt.Dimension jdim

Jemboss window dimension

jdimExtend

public static java.awt.Dimension jdimExtend

Constructor Detail

Jemboss

public Jemboss()

Method Detail

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent ae)

Action event to open the file manager

Specified by:

actionPerformed in interface java.awt.event.ActionListener

main

public static void main(java.lang.String[] args)

Launches Jemboss in standalone or client-server mode.